CDS

Accession Number TCMCG051C40135
gbkey CDS
Protein Id XP_002321063.3
Location complement(join(10654289..10654387,10654509..10654561,10654770..10654847,10654972..10655038,10655126..10655260,10655695..10655839,10655915..10656154,10656253..10656433,10656519..10656954))
Gene LOC7466282
GeneID 7466282
Organism Populus trichocarpa

Protein

Length 477aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002321027.3
Definition DNA cross-link repair protein SNM1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA cross-link repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K15340        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0000726        [VIEW IN EMBL-EBI]
GO:0000781        [VIEW IN EMBL-EBI]
GO:0000784        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004529        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008409        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016233        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016895        [VIEW IN EMBL-EBI]
GO:0031848        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035312        [VIEW IN EMBL-EBI]
GO:0036297        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043247        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCACAATCGGCGGCGCTGGAGGAGATTATGATTCCAAAGAAGAATGGACCGAATTTGAATGGTTGGAAGATGCGCTCTCAATTATAGAGAATATTGAGGAGCAAAGTTACCAGATTCATCCATCGATTAAACAAGAAGAAGAAGAAGATGGAGATGGTGGTGATGGGAGTTTCTCTGCGGAATTCTATCGGTGTGGAACCGATTGGTCTTGCCTGTCGCCGGCGGCTGAAGTAGTTGAACCTTCCCATTCAAGAAATCTGAAACAGGCGAATCTATGGCAGATGTGGGGCCAAAACAAACCTTCTTCCCTTTCCTCTCCGCCTCCGAAGAAGAAGCTGAAGCCAACTCAATTTTGCAGCCAAGGCAAGGCGGCTTCCTCGTCTCCTAAGCATAACCGCCCTCGCGCTTGCCCTTTCTATAAACGGATTCCAGATACAGGTTTCTCAGTTGATGCATTCCGGTATGGTCCGATCCCAGGATGCTCTGCGTACTTCCTGACCCACTTCCATTATGATCATTACGGTGGCCTTACCAAAGGATGGTCTCATGGCCCTATTTATTGTACTCCTCTCACTGCTCGCCTCCTTACAATCTGTCTCTCCCTCAATTCCTTATATATTCATCCATTGGAACTTGACACAGAATATGTTATTCAAGGAGTTAAAGTAACATTACTAGAAGCTAATCACTGTCCCGGTGCTGCTCTCCTTCATTTCCGTCTCCCGACTGGACTCTGCTATTTGCACACTGGAGATTTCAGGGCTTCTAAACTTATGCAGGCCCATCCACTTCTTGCAAACAACAGAGTTAACGTGCTTTACTTAGATACAACCTATTGCAATCCAAAGTACAAGTTTCCTTCAAAGGAAGATGTGTTGAGTTATGTTGTTAGAGTTACTAAGAGTTCTCTCAAAAAGCAACCTAAAACCCTTGTTGTTGTCGGAGCGTATAGTATTGGCAAAGAGAGTGTTTATCTTGCCATTTCCAAGGCATTAGGGGTTAAAATATATGCAAATAATTCAAGGAGACGGATTCTGCAATCTTTTGGTTGGCCTGATCTTTCGACGAATCTTTGTACAAAAGCTATAGACACATGTCTTCATGTGCTGCCCATATCTTCCCTGCGATATGAGACCTTGAAGGATTACTTGAAGAATCATGTAAATCAGTATGCAGCAGTTTTGGCATTCCGGCCAACAGGCTGGACTTACTCAGAAGGTTTAGGCAGAGAGCTTGATCTAATTAGGCCTAGCACTAGAGGCAACATCACAATATATGGAGTTCCATACAGTGAGCACTCTAGTTTCACAGAGCTGAGAGACTTTGTCGAGTTTTTGAAGCCTGACAAGATAATTCCTACAGTAAATGTTGGGAATCCAGATAATCGAGATAAGATGCAATCTTATTTCCGGGAATGGCTTAAAGGGTAG
Protein:  
MSTIGGAGGDYDSKEEWTEFEWLEDALSIIENIEEQSYQIHPSIKQEEEEDGDGGDGSFSAEFYRCGTDWSCLSPAAEVVEPSHSRNLKQANLWQMWGQNKPSSLSSPPPKKKLKPTQFCSQGKAASSSPKHNRPRACPFYKRIPDTGFSVDAFRYGPIPGCSAYFLTHFHYDHYGGLTKGWSHGPIYCTPLTARLLTICLSLNSLYIHPLELDTEYVIQGVKVTLLEANHCPGAALLHFRLPTGLCYLHTGDFRASKLMQAHPLLANNRVNVLYLDTTYCNPKYKFPSKEDVLSYVVRVTKSSLKKQPKTLVVVGAYSIGKESVYLAISKALGVKIYANNSRRRILQSFGWPDLSTNLCTKAIDTCLHVLPISSLRYETLKDYLKNHVNQYAAVLAFRPTGWTYSEGLGRELDLIRPSTRGNITIYGVPYSEHSSFTELRDFVEFLKPDKIIPTVNVGNPDNRDKMQSYFREWLKG